Index

C

cd() (in module pytest_ngsfixtures.utils)

E

executable() (pytest_ngsfixtures.shell.shell class method)

F

Fixture (class in pytest_ngsfixtures.plugin)

G

get_conda_root() (in module pytest_ngsfixtures.shell)

I

iter_stdout() (pytest_ngsfixtures.shell.shell static method)

K

keys() (pytest_ngsfixtures.plugin.Fixture method)

L

localpath() (in module pytest_ngsfixtures.os)

P

prefix() (pytest_ngsfixtures.shell.shell class method) pytest_addoption() (in module pytest_ngsfixtures.plugin) pytest_configure() (in module pytest_ngsfixtures.plugin) pytest_ngsfixtures (module) pytest_ngsfixtures.config (module)

pytest_ngsfixtures.os (module) pytest_ngsfixtures.plugin (module) pytest_ngsfixtures.shell (module) pytest_ngsfixtures.utils (module) pytest_ngsfixtures.wm (module) pytest_ngsfixtures.wm.snakemake (module)

R

read_stdout() (pytest_ngsfixtures.shell.shell static method)

ref() (in module pytest_ngsfixtures.plugin) run() (in module pytest_ngsfixtures.wm.snakemake)

S

safe_copy() (in module pytest_ngsfixtures.os) safe_mktemp() (in module pytest_ngsfixtures.os) safe_symlink() (in module pytest_ngsfixtures.os)

samples() (in module pytest_ngsfixtures.plugin) shell (class in pytest_ngsfixtures.shell) snakefile() (in module pytest_ngsfixtures.wm.snakemake) stdout() (pytest_ngsfixtures.shell.shell static method)

T

testdata() (in module pytest_ngsfixtures.plugin)